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Test Code CMVLR Cytomegalovirus (CMV) Molecular Detection, PCR, Lower Respiratory


Ordering Guidance


For plasma specimens, order CMVQN / Cytomegalovirus (CMV) DNA Detection and Quantification by Real-Time PCR, Plasma.



Necessary Information


Specimen source is required.



Specimen Required


Specimen Type: Lower respiratory

Source: Bronchial washing, bronchoalveolar lavage, fluid/washings from lung, sputum, tracheal secretions, tracheal aspirates

Container/Tube:

Preferred: Sterile, screwcap, 5-mL aliquot tube

Acceptable: Sterile container

Specimen Volume: 1 mL

Collection Instructions: Do not centrifuge.


Useful For

Rapid qualitative detection of cytomegalovirus (CMV) DNA in lower respiratory specimens

 

This test is not intended for the monitoring of CMV disease progression or response to therapy.

Reporting Name

Cytomegalovirus, PCR, Lower Resp

Specimen Type

Varies

Specimen Minimum Volume

0.5 mL

Specimen Stability Information

Specimen Type Temperature Time
Varies Refrigerated (preferred) 7 days
  Frozen  7 days

Reject Due To

Lower respiratory swab
Calcium alginate-tipped swab
Wood swab
Transport swab containing gel
Feces
Paraffin blocks
Tissue specimens
Tissue biopsy
Bronchial brushings
Heat-inactivated specimens
Lower respiratory in transport media
Reject

Reference Values

Negative

 

Reference values apply to all ages.

Supportive Data

The following validation data support the use of this assay for clinical testing.

 

Accuracy:

A total of 107 previously tested (n=78) and prospective (n=29) lower respiratory clinical specimens submitted to our reference laboratory for routine cytomegalovirus (CMV) real-time polymerase chain reaction (PCR) (CMVPV / Cytomegalovirus (CMV) Molecular Detection, PCR, Varies) were tested by this test.

 

The overall qualitative positive percent agreement was 96% (48/50). The overall qualitative negative percent agreement was 82% (47/57).

 

Additional CMV testing on 8 of the 12 discrepant specimens suggests these are true CMV positive specimens, which increased the overall percent agreement to 96% (103/107). Result discrepancies were notable for specimens retrospectively collected that were subjected to extended frozen storage prior to concurrent testing by routine CMV real-time PCR and the new CMV lower respiratory assay (Diasorin Simplexa CMV). Results suggest increased assay sensitivity over the routine CMV real-time PCR assay for lower respiratory specimens, especially for those undergoing extended frozen storage (≤-70° C).

 

Analytical Sensitivity/Limit of Detection:

To evaluate the analytical sensitivity, whole virus control (ZeptoMetrix) was spiked into residual analyte-negative lower respiratory fluid specimens between 0.1 and 1000  copies/mL and tested in six replicates per dilution. The lowest concentration detected in all six replicates was confirmed by spiking 20 unique residual analyte-negative lower respiratory fluid specimens. A positive result was obtained in 19/20 (95%) replicates, and the analytical sensitivity (limit of detection) was determined to be 90 copies/mL.

 

Analytical Specificity:

The Simplexa Congenital CMV Direct assay is not US Food and Drug Administration-authorized for lower respiratory specimens. However, the kit instructions for use (Simplexa Congenital CMV Direct, IFUK.US.MOL2255, Rev. 01, 11/2022) indicate no cross-reactivity was observed with a panel of 41 organisms spiked into an upper-respiratory matrix. Inclusivity was confirmed with CMV strains AD-169, Merlin, Towne and Toledo. Additionally, in silico BLAST analysis demonstrated that the assay should detect at least 327 CMV sequences available in the NCBI database, including the 4 CMV genotypes gB1, gB2, gB3 and gB4.

 

Additionally, a panel of 7 organisms commonly found in the lower respiratory tract were tested by this method as part of this validation, and no was signal detected.

Day(s) Performed

Monday through Sunday

Report Available

Same day/1 to 2 days

Specimen Retention Time

7 days

Performing Laboratory

Mayo Clinic Laboratories in Rochester

CPT Code Information

87496

LOINC Code Information

Test ID Test Order Name Order LOINC Value
CMVLR Cytomegalovirus, PCR, Lower Resp 104760-4

 

Result ID Test Result Name Result LOINC Value
CMVSS Specimen Source 31208-2
621771 CMVLR, PCR 104760-4