Test Code CDPCR Clostridioides difficile Toxin, PCR, Feces
Ordering Guidance
This test is validated for unformed (liquid or soft) fecal specimens collected from patients suspected of having Clostridioides difficile infection.
Specimen Required
The high sensitivity of amplification by polymerase chain reaction requires the specimen to be processed in an environment in which contamination of the specimen by Clostridioides difficile toxin DNA is unlikely.
Submit only 1 of the following specimens:
Preferred:
Specimen Type: Preserved feces
Supplies: Culture and Sensitivity Stool Transport Vial (T058)
Container/Tube: Commercially available transport system specific for recovery of enteric pathogens from fecal specimens (15 mL of nonnutritive transport medium containing phenol red as a pH indicator, either Cary-Blair or Para-Pak C and S)
Specimen Volume: Representative portion of feces; 5 mL
Collection Instructions:
1. Collect fresh fecal specimen and submit in container with transport medium.
2. Within 2 hours of collection, place feces in preservative.
Specimen Stability Information: Ambient (preferred) <5 days/Refrigerated <5 days
Acceptable:
Specimen Type: Unpreserved feces
Supplies:
-Stool container, Small (Random), 4 oz Random (T288)
-Stool Collection Kit, Random (T635)
Container/Tube: Fecal container
Specimen Volume: Representative portion of feces
Collection Instructions: Collect fresh fecal specimen and submit representative sample in fecal container.
Specimen Stability Information: Refrigerated (preferred) <5 days/Frozen <5 days
Useful For
Sensitive, specific, and rapid diagnosis of Clostridioides (Clostridium) difficile-associated diarrhea and pseudomembranous colitis
The test is not recommended as a test of cure.
Testing Algorithm
For more information see Laboratory Testing for Infectious Causes of Diarrhea.
Special Instructions
Reporting Name
C. difficile Toxin, PCR, FSpecimen Type
FecalSpecimen Minimum Volume
See Specimen Required
Specimen Stability Information
| Specimen Type | Temperature | Time |
|---|---|---|
| Fecal | Varies | 5 days |
Reject Due To
| Feces in gel transport medium ECOFIX preservative Formalin or polyvinyl acetate (PVA) fixative Preserved feces received frozen |
Reject |
Reference Values
Negative
Method Description
Test is performed on the Cepheid GeneXpert Dx System, which automates and integrates sample purification, nucleic acid amplification, and detection of the target sequence in simple or complex samples using real-time polymerase chain reaction (PCR) and reverse transcription PCR assays. The system requires the use of single-use disposable cartridges that hold the PCR reagents and host the PCR process. Because the cartridges are self-contained, cross-contamination between samples is eliminated.
The Cepheid Xpert C difficile/Epi Assay is a qualitative in vitro diagnostic test for rapid detection of toxin B gene sequences and for presumptive identification of 027/NAP1/BI strains of toxigenic Clostridioides (Clostridium) difficile from patients suspected of having C difficile infection (CDI). Presumptive identification of 027/NAP1/BI strains of C difficile is by detection of binary toxin gene sequences and the single base pair deletion at nucleotide 117 in the tcdC gene. The tcdC gene encodes for a negative regulator in C difficile toxin production.
The Xpert C difficile/Epi Assay is intended as an aid in the diagnosis of CDI. Detection of 027/NAP1/BI strains of C difficile by the Xpert C difficile/Epi Assay is presumptive and is solely for epidemiological purposes and is not intended to guide or monitor treatment for C difficile infections. Concomitant culture is necessary only if further typing or organism recovery is required.(Package insert: Xpert C difficile /Epi. Cepheid; Rev. J, 04/2020)
Day(s) Performed
Monday through Sunday
Report Available
Same day/1 daySpecimen Retention Time
7 daysPerforming Laboratory
Mayo Clinic Laboratories in Rochester
CPT Code Information
87493
LOINC Code Information
| Test ID | Test Order Name | Order LOINC Value |
|---|---|---|
| CDPCR | C. difficile Toxin, PCR, F | 54067-4 |
| Result ID | Test Result Name | Result LOINC Value |
|---|---|---|
| TCDRR | C. difficile Toxin, PCR | 54067-4 |
Forms
If not ordering electronically, complete, print, and send 1 of the following with the specimen:
-Microbiology Test Request (T244)